AAMT Publications and Presentations
   

Borin, J.M., Moser, M.L., Hansen, A.G., Beauchamp, D.A., Corbett, S.C., Dumbault, B.R., Pruitt, C., Ruesink, J.L., and Donoghue, C. (2017).  Energetic requirements of green sturgeon (Acipenser medirostris) feeding on burrowing shrimp (Neotrypaea californiensis) in estuaries:  importance of temperature, reproductive investment, and residence time. Environmental Biology of Fishes.
 
Borin, J., Ruesink, J., Donoghue, C., Hansen, A., Pruitt, C., and Beauchamp, D. (2015). Bioenergetics Approach to Estimating Green Sturgeon Consumption.  Olympia, WA:  DNR Aquatic Assessment and Monitoring Team.  Poster presentation prepared for Coastal and Estuarine Research Federation (CERF) Conference, 2015.  Portland, OR.
 
Calambokidis, J.  (2015). Field Report: Pilot Study on intertidal ghost shrimp feeding gray whale in N Puget Sound, WA.  Olympia, WA: Cascadia Research.  Prepared for WA: DNR Aquatic Assessment and Monitoring Team.
 
Calambokidis, J.  (2016). Contract Report: Study of seasonal resident gray whales feeding strategy in N. Puget Sound, WA. in 2016.  Olympia, WA: Cascadia Research.  Prepared for WA: DNR Aquatic Assessment and Monitoring Team.
 
Donoghue, C., Gabriel A., & Cordner, D. (2018).  Dynamics of seagrass (Zostera spp.) edges and landscape characteristics in Washington State.  Poster Presentation, South Sound Science Symposium, October 16, 2018, Squaxin Island Tribe's Events Center, Shelton, WA.
 
Donoghue, C. (2019).  Mechanical management of burrowing shrimp on WA Coast, 26th Conference for Shellfish Growers, Washington Sea Grant, Alderbrook Resort and Spa, March 11-12, 2019.
 
Donoghue, C.  (2017). Comparison of light transmitted through different types of decking used in nearshore over-water structures.  Presentation prepared by WA: DNR Aquatic Assessment and Monitoring Team.
 
Donoghue, C.  (2015). Technical Report: Comparison of light transmitted through different types of decking used in the nearshore over-water structures.  Olympia, WA: DNR Aquatic Assessment and Monitoring Team.
 
Donoghue, C.  (2013). Outer coast estuary Zostera japonica 2013 mapping and monitoring.  Olympia, WA: DNR Aquatic Assessment and Monitoring Team.
 
Gabriel, A., & Donoghue, C. (2018).  PAR and light extinction beneath various dock deck types, Pleasant Harbor Marina, WA.  Poster Presentation, South Sound Science Symposium, October 16, 2018, Squaxin Island Tribe's Events Center, Shelton, WA.
 
Gabriel, A.  (2016). Eelgrass Edge Dynamics.  Ellensburg, WA: Central Washington University.  Presentation prepared for WA: DNR Aquatic Assessment and Monitoring Team.
 
Gabriel, A., Donoghue, C., Bodensteiner, L., Adolphson, S., Cordner, D., and Stilwater, L.  (2016). PAR and light extinction above eelgrass, at bed surface, and beneath decks in Puget Sound, WA.  Poster presentation prepared for Coastal and Estuarine Research Federation (CERF) 2015.  Portland, Oregon.
 
Gabriel, A. (2015). Eelgrass Cover and Tidal Inundation by Elevation.  Ellensburg, WA: Central Washington University.  Presentation prepared for WA: DNR Aquatic Assessment and Monitoring Team.
 
Greiner C.M., Klinger T., Ruesink J.L., Barber J.S., and Horwith M.J. (2018).  Habitat effects of macrophytes and shell on carbonate chemistry and juvenile clam recruitment, survival, and growth, Journal of Experimental Marine Bilogy and Ecology.
 
Gross, C., Donoghue, C., Pruitt, C., Trimble, A. C., and Ruesink, J. L. (2019).  Nekton community responses to seagrass differ with shoreline slope, Estuaries and Coasts, published online, doi:10.1007/s12237-019-00556-8.
 
Gross, C., Donoghue, C., Pruitt, C., Trimble, A. C., and Ruesink, J. L. (2017). Taxonomic and functional assessment of mesopredator diversity across an estuarine habitat mosaic.  Ecosphere 8(4):e01792.
 
Gross, C., Ruesink, J. L., Pruitt, C., Trimble, A. C., Donoghue, C. (2019).  Temporal variation in intertidal habitat use by nekton at seasonal and diel scales Journal of Experimental Marine Biology and Ecology 516, 25-34 doi:10.1016/j.jembe.2019.04.009.
 
Horwith, M. J. (2019).  State of ANeMoNe Report.
 
Lowe A.T., Kobelt J., Horwith M.J., and Ruesink J.L. (2018).  Ability of eelgrass to alter oyster growth and physiology is spatially limited and offset by increasing predation risk, Estuaries and Coasts.
 
Markos, P., Ryan, A., and Donoghue, C. (2015).  Monitoring eelgrass bed dynamics and lower edge movement:  applications for resource management in Washington State.  Poster presentation prepared for Coastal and Estuarine Research Federation (CERF) 2015. Portland, Oregon.
 
Polston Barnes, J.  (2014). Identification of Freshwater Sites for Aquatic Reserves: Lake and Rivers of Washington State.  Olympia, WA: DNR Aquatic Assessment and Monitoring Team.
 
Polston Barnes, J., Donoghue, C., and James, A.  (2017). Technical Report: Chemicals of Emerging Concern in the Nearshore: POCIS at Shellfish Resources Sites.  Olympia, WA: DNR Aquatic Assessment and Monitoring Team.
 
Pruitt, C. (2016).  Intertidal ghost shrimp in Puget Sound:  enough for gray whales and a sustainable commercial harvest?  Whidbey Basin, North Puget Sound, Washington.  Olympia, WA:  DNR Aquatic Assessment and Monitoring Team.  Presentation for the 23rd Conference for Shellfish Growers, March 2016.
 
Pruitt, C. and Donoghue, C.  (2016)  Technical Report:  Ghost shrimp: commercial harvest and gray whale feeding, North Puget Sound, WA.  Olympia, WA: DNR Aquatic Assessment and Monitoring Team.
 
Ruesink, J. L., Gross, C., Pruitt, C., Trimble, A. C., Donoghue, C. (2019).  Habitat structure influences the seasonality of nekton in seagrass, Marine Biology, 166(75), 1-14, doi:10.1007/s00227-019-3519-z.
 
Spencer L.H., Horwith M.J., Timmins-Schiffman E., and Roberts S.B. (2019).  Pacific geoduck (Panopea gererosa) resilience to natural pH variation, Comparative Biochemistry and Physiology - Part D:  Genomics and Proteomics.
 
Szypulski, E. J. (2018). Ecological effects of overwater structures on subtidal kelp, Northern Puget Sound, WA.  Central Washington University, Master Thesis 146 pps.
 
Venkataraman Y.R., Timmins-Schiffman E., Horwith M.J., Lowe A.T., Nunn B., Vadopalas B., Spencer L.H., and Roberts S.B. (2019).  Characterization of Pacific oyster Crassostrea gigasproteomic proteomic response to natural environmental differences, Marine Ecology Progress Series.